Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015949897.1_cds_XP_016490599.1_81006
CDS Infomation

[gene=LOC107810351] [db_xref=GeneID:107810351] [protein=MACPF domain-containing protein CAD1] [protein_id=XP_016490599.1] [location=complement(join(23611..24258,25162..25316,26013..26196,26336..26531,27084..27322,28113..28403))] [gbkey=CDS]
Sequence

ATGGATTCAAATCCCAACAAGTCTTCTTGTTTAGCCTCAGATGCTTTGATTACTACTCTC
AGCAACTCAATCCAAGCTTTGGGTAGAGGGTTTGATGTCACTTCTGATATTAGGCTTCTG
TACTGTAAAGGGACACCAGGTTCTCGTTTAGTTCATCTTGATGAAGCAAATCGTGTGGAT
CTTTTGGTCCCAGATGGGGTTGGTGTTTTGATTCCAAATGTTACAGCGGATATTGAAATT
TCACTTGGGATGAGAAATATCGAGGCCACACCTGTTTGTACCTTCCATGAGATGGCAAAG
TACTTCAATGCAATGTCGAATATATCTGAAGATGTTCCACTTGGGAGTTTTAATGCCATG
TTTAACTTCACTGGTTCATGGCAACATGATGCAGCAGCTACTAAATCCCTTGCCATGATT
GGACATGTTATCCCACTCTATACAGTCAGATTAGTAAAGCTAGATTTACTTCTGCGGGAT
GAAATCAAGCGCGCTGTTCCATACTCTTGGGATCCTGCATCGCTGGCAAGCTTTATTGAA
AACTATGGCACCCATATTGTCACCTCCGCGACTATTGGTGGTAGGGATGTAGTTTATATT
AAACAGCACCAGTCATCTCCTTTATCAGTTTCAGACATTGAAGACTATGTGAAAGACATT
GGAGATCAGAGATTCTCCGATTTGAAGAATCTCTCAAGTGCCGGACCTTTAAGATACAAG
GACAAGGACGTTACAGTTATTTTCCGCAGAAGAGGAGGTGATGACCTGGAGCAGAGTCAT
GAAAAGTGGGCAAGGACTGTAGAAACATCACCAGATGTGATCAACATGACATTTACTCCT
ATTGTGTCATTGCTTGAAGAGGTGCCTGGAATAAAGTACCTGAGCCGTGCAATTGAGTTA
TACTTGGAATACAAGCCACCAATAGAAGATTTACAATATTTCTTAGATTACCAAATAGCT
CGTGTGTGGGCTCCAGAGCAAAATAACTTGCAAAGAAAGGAGCCTGTATGTGCTTCCCTA
CAATTCAGTTTGATGAGTCCTAAGCTGTATATTAGCCCAGATCAGGTGACAGTGGGGCGT
AAGCCAGTGACAGGGCTCAGGCTCAGCCTAGAAGGTAGCAAGCAGAACCGTCTTTCAGTC
AATTTGCAGCACCTCGTTTCCCTTCCTAAGATCCTTCAACCCCACTGGGACACACACATG
GCTATAGGTGCACCAAAATGGAAAGGTCCCGAGGAGCAGGATAGCAGATGGTTTGAACCA
ATCAAGTGGAAGAATTTCTCCCACGTAAGCACAGCACCTATTGAACACACTGAGACTTCC
ATTGGAGATCTCTCTGGTGTTTACATTGTGACGGGGGCTCAGCTTGGTTTTTGGAATTTT
GGTGCCAAGAGTGTCTTGCATTTGAAACTCCTTTTTTCCAAGGTACCTGGTTGTACAATA
AGAAGATCAGTATGGGATCATAGTCCATCAAACCTATCAGCAGTACAAAGGATTGATGGT
TCTTCAACATCACTTGTGAACGAAAAAACTGCCGAAAACAAGAGAGGAGATAGTTCCAGC
CAAATGGGGAAATTGGCAAAGATTGTAGACATGACAGAAATGTCAAAGGGGCCACAGGAT
GCACCAGGGCACTGGTTGGTAACAGGAGCTAAACTTGGGGTTGATAAAGGAAAAATTGTG
CTAAGAGTGAAGTATTCCCTGTTGAATTACTAA

Peptide Sequence

PEP ID

XP_016490599.1
PEP Infomation

PREDICTED: MACPF domain-containing protein CAD1 [Nicotiana tabacum]
Sequence

MDSNPNKSSCLASDALITTLSNSIQALGRGFDVTSDIRLLYCKGTPGSRLVHLDEANRVD
LLVPDGVGVLIPNVTADIEISLGMRNIEATPVCTFHEMAKYFNAMSNISEDVPLGSFNAM
FNFTGSWQHDAAATKSLAMIGHVIPLYTVRLVKLDLLLRDEIKRAVPYSWDPASLASFIE
NYGTHIVTSATIGGRDVVYIKQHQSSPLSVSDIEDYVKDIGDQRFSDLKNLSSAGPLRYK
DKDVTVIFRRRGGDDLEQSHEKWARTVETSPDVINMTFTPIVSLLEEVPGIKYLSRAIEL
YLEYKPPIEDLQYFLDYQIARVWAPEQNNLQRKEPVCASLQFSLMSPKLYISPDQVTVGR
KPVTGLRLSLEGSKQNRLSVNLQHLVSLPKILQPHWDTHMAIGAPKWKGPEEQDSRWFEP
IKWKNFSHVSTAPIEHTETSIGDLSGVYIVTGAQLGFWNFGAKSVLHLKLLFSKVPGCTI
RRSVWDHSPSNLSAVQRIDGSSTSLVNEKTAENKRGDSSSQMGKLAKIVDMTEMSKGPQD
APGHWLVTGAKLGVDKGKIVLRVKYSLLNY

Transcript Sequence

Gene sequence data has not been registered.